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Arduino IR Remote? Answered

I have 2 sketches I'd like to combine. I'd like to a remote to turn on an led to simulate a lighthouse. I can get the led to turn on and off by my remote, and I can run the effect I want separately but the strobe effect I want has a FOR statement that I don't know how to incorporate in to the remote sketch. If anyone can help I'd appreciate it. The strobe effect uses analog write